STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER72351.1Hypothetical protein. (223 aa)    
Predicted Functional Partners:
SER72371.1
Urea carboxylase.
 
  
 0.979
SER09362.1
Urea carboxylase.
 
  
 0.947
SER09342.1
Allophanate hydrolase.
 
  
 0.931
SER05820.1
Glutamate synthase (ferredoxin).
    
  0.888
SER72334.1
Hypothetical protein.
 
    
0.835
SER72311.1
Amino acid transporter.
       0.544
gatA
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).
    
 0.488
Your Current Organism:
Nitrosomonas sp. Nm51
NCBI taxonomy Id: 133720
Other names: N. sp. Nm51, Nitrosomonas sp. NM 51
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.