STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER75949.1Long-chain fatty acid transport protein. (470 aa)    
Predicted Functional Partners:
SEQ92331.1
3-hydroxyacyl-CoA dehydrogenase.
 
  
 0.641
SER75966.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
       0.619
SER14920.1
1-acyl-sn-glycerol-3-phosphate acyltransferases.
  
  
 0.578
SER51209.1
Acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase.
  
  
 0.550
SER40081.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
  
  
 0.535
Your Current Organism:
Nitrosomonas sp. Nm51
NCBI taxonomy Id: 133720
Other names: N. sp. Nm51, Nitrosomonas sp. NM 51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.