STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER75966.1PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. (842 aa)    
Predicted Functional Partners:
SEQ82705.1
Signal transduction histidine kinase.
 0.999
SEQ89963.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
 
0.999
SEQ94615.1
Methyl-accepting chemotaxis protein.
  
 0.999
SER09996.1
PAS domain S-box-containing protein.
  
 0.999
SER27650.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 
0.999
SER44199.1
Response regulator receiver domain-containing protein.
  
 0.999
SER45876.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
0.999
SER60848.1
Signal transduction histidine kinase.
 0.999
SER61417.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
0.999
SER61442.1
HPt (histidine-containing phosphotransfer) domain-containing protein.
 
 0.999
Your Current Organism:
Nitrosomonas sp. Nm51
NCBI taxonomy Id: 133720
Other names: N. sp. Nm51, Nitrosomonas sp. NM 51
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