STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER86499.1Transposase. (249 aa)    
Predicted Functional Partners:
SER72956.1
Hypothetical protein.
 
     0.833
SER72931.1
Hypothetical protein.
  
    0.779
SER85899.1
IstB-like ATP binding protein.
  
    0.779
SER85944.1
Hypothetical protein.
  
    0.779
SER26715.1
IstB-like ATP binding protein.
  
    0.778
SER87106.1
Integrase core domain-containing protein.
  
    0.446
SER86477.1
Transposase DDE domain group 1.
       0.429
Your Current Organism:
Nitrosomonas sp. Nm51
NCBI taxonomy Id: 133720
Other names: N. sp. Nm51, Nitrosomonas sp. NM 51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.