Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDX92626.1 | SDY40222.1 | SAMN05421755_100270 | SAMN05421755_102038 | Hypothetical protein. | Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family. | 0.820 |
SDY00425.1 | SDY40222.1 | SAMN05421755_100478 | SAMN05421755_102038 | Antitoxin HicB. | Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family. | 0.820 |
SDY25444.1 | SDY40222.1 | SAMN05421755_101319 | SAMN05421755_102038 | Predicted nuclease of the RNAse H fold, HicB family. | Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family. | 0.820 |
SDY25444.1 | SDY43877.1 | SAMN05421755_101319 | SAMN05421755_102229 | Predicted nuclease of the RNAse H fold, HicB family. | Predicted nuclease of the RNAse H fold, HicB family. | 0.519 |
SDY40222.1 | SDX92626.1 | SAMN05421755_102038 | SAMN05421755_100270 | Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family. | Hypothetical protein. | 0.820 |
SDY40222.1 | SDY00425.1 | SAMN05421755_102038 | SAMN05421755_100478 | Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family. | Antitoxin HicB. | 0.820 |
SDY40222.1 | SDY25444.1 | SAMN05421755_102038 | SAMN05421755_101319 | Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family. | Predicted nuclease of the RNAse H fold, HicB family. | 0.820 |
SDY40222.1 | SDY40245.1 | SAMN05421755_102038 | SAMN05421755_102039 | Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family. | Hypothetical protein. | 0.788 |
SDY40222.1 | SDY43877.1 | SAMN05421755_102038 | SAMN05421755_102229 | Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family. | Predicted nuclease of the RNAse H fold, HicB family. | 0.820 |
SDY40245.1 | SDY40222.1 | SAMN05421755_102039 | SAMN05421755_102038 | Hypothetical protein. | Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family. | 0.788 |
SDY43877.1 | SDY25444.1 | SAMN05421755_102229 | SAMN05421755_101319 | Predicted nuclease of the RNAse H fold, HicB family. | Predicted nuclease of the RNAse H fold, HicB family. | 0.519 |
SDY43877.1 | SDY40222.1 | SAMN05421755_102229 | SAMN05421755_102038 | Predicted nuclease of the RNAse H fold, HicB family. | Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family. | 0.820 |