STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY64572.1Osmotically-inducible protein OsmY, contains BON domain. (241 aa)    
Predicted Functional Partners:
SDY88008.1
Cytochrome c oxidase subunit 2.
  
     0.505
SDY87934.1
Hypothetical protein.
  
     0.462
SDY92826.1
(1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase.
  
     0.461
SDZ00591.1
PAS domain S-box-containing protein.
  
     0.437
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
       0.423
selU
tRNA 2-selenouridine synthase; Involved in the post-transcriptional modification of the uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Catalyzes the conversion of 2-thiouridine (S2U-RNA) to 2- selenouridine (Se2U-RNA). Acts in a two-step process involving geranylation of 2-thiouridine (S2U) to S-geranyl-2-thiouridine (geS2U) and subsequent selenation of the latter derivative to 2-selenouridine (Se2U) in the tRNA chain.
       0.423
SDY87987.1
Cytochrome c oxidase subunit 1.
  
     0.421
SDY07597.1
Protein of unknown function.
  
     0.417
Your Current Organism:
Nitrosomonas sp. Nm33
NCBI taxonomy Id: 133724
Other names: N. sp. Nm33
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