Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDY15000.1 | SDY74354.1 | SAMN05421755_100927 | SAMN05421755_104414 | Hypothetical protein. | Hypothetical protein. | 0.840 |
SDY50352.1 | SDY74354.1 | SAMN05421755_102627 | SAMN05421755_104414 | Hypothetical protein. | Hypothetical protein. | 0.403 |
SDY74354.1 | SDY15000.1 | SAMN05421755_104414 | SAMN05421755_100927 | Hypothetical protein. | Hypothetical protein. | 0.840 |
SDY74354.1 | SDY50352.1 | SAMN05421755_104414 | SAMN05421755_102627 | Hypothetical protein. | Hypothetical protein. | 0.403 |
SDY74354.1 | SDY94668.1 | SAMN05421755_104414 | SAMN05421755_10702 | Hypothetical protein. | PAS domain S-box-containing protein. | 0.514 |
SDY74354.1 | SDZ14171.1 | SAMN05421755_104414 | SAMN05421755_11322 | Hypothetical protein. | Predicted Kef-type K+ transport protein, K+/H+ antiporter domain; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.457 |
SDY94668.1 | SDY74354.1 | SAMN05421755_10702 | SAMN05421755_104414 | PAS domain S-box-containing protein. | Hypothetical protein. | 0.514 |
SDY94668.1 | SDZ14171.1 | SAMN05421755_10702 | SAMN05421755_11322 | PAS domain S-box-containing protein. | Predicted Kef-type K+ transport protein, K+/H+ antiporter domain; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.662 |
SDZ14171.1 | SDY74354.1 | SAMN05421755_11322 | SAMN05421755_104414 | Predicted Kef-type K+ transport protein, K+/H+ antiporter domain; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | Hypothetical protein. | 0.457 |
SDZ14171.1 | SDY94668.1 | SAMN05421755_11322 | SAMN05421755_10702 | Predicted Kef-type K+ transport protein, K+/H+ antiporter domain; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | PAS domain S-box-containing protein. | 0.662 |