STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY77211.1Site-specific recombinase XerD; Belongs to the 'phage' integrase family. (337 aa)    
Predicted Functional Partners:
SDY77238.1
Hypothetical protein.
 
     0.714
SDY27845.1
3-hydroxyacyl-CoA dehydrogenase.
   
 
  0.490
SDX95349.1
comF family protein.
   
    0.479
SDY63846.1
Phage integrase family protein.
  
     0.458
SDY74326.1
Lipase (class 3).
  
     0.442
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.436
SDY94794.1
Ribonuclease T2; Belongs to the RNase T2 family.
  
     0.427
aroQ
3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.
       0.414
SDY73953.1
Alginate export.
  
    0.409
SDY69636.1
PAS domain S-box-containing protein.
  
    0.406
Your Current Organism:
Nitrosomonas sp. Nm33
NCBI taxonomy Id: 133724
Other names: N. sp. Nm33
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.