STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ02584.1Dicarboxylate transport. (874 aa)    
Predicted Functional Partners:
SDX86855.1
Translocation and assembly module TamA.
 
 
 0.953
SDZ02565.1
YnbE-like lipoprotein.
 
   
 0.886
SDZ02544.1
Hypothetical protein.
 
   
 0.868
SDZ02607.1
Phosphate-selective porin OprO and OprP.
 
     0.769
SDY77238.1
Hypothetical protein.
  
     0.729
SDX99407.1
Acetyltransferase (GNAT) family protein.
  
     0.706
SDZ15153.1
Glutathione S-transferase.
  
     0.690
SDZ02917.1
Plasmid recombination enzyme.
 
     0.679
SDY73953.1
Alginate export.
  
     0.611
SDX92982.1
Diacylglycerol kinase (ATP).
  
     0.602
Your Current Organism:
Nitrosomonas sp. Nm33
NCBI taxonomy Id: 133724
Other names: N. sp. Nm33
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.