Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDY18537.1 | SDY59668.1 | SAMN05421755_101066 | SAMN05421755_103222 | Cysteine desulfurase. | Hypothetical protein. | 0.600 |
SDY18537.1 | SDZ06821.1 | SAMN05421755_101066 | SAMN05421755_10993 | Cysteine desulfurase. | Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor. | 0.962 |
SDY18537.1 | SDZ06840.1 | SAMN05421755_101066 | SAMN05421755_10994 | Cysteine desulfurase. | Iron-sulfur cluster assembly protein; Belongs to the HesB/IscA family. | 0.932 |
SDY18537.1 | SDZ06859.1 | SAMN05421755_101066 | SAMN05421755_10995 | Cysteine desulfurase. | Iron-regulated ABC transporter membrane component SufB. | 0.689 |
SDY18537.1 | SDZ06879.1 | SAMN05421755_101066 | SAMN05421755_10996 | Cysteine desulfurase. | Fe-S cluster assembly ATP-binding protein. | 0.720 |
SDY18537.1 | SDZ06897.1 | SAMN05421755_101066 | SAMN05421755_10997 | Cysteine desulfurase. | Fe-S cluster assembly protein SufD. | 0.607 |
SDY18537.1 | SDZ06917.1 | SAMN05421755_101066 | SAMN05421755_10998 | Cysteine desulfurase. | Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.967 |
SDY18537.1 | SDZ06935.1 | SAMN05421755_101066 | SAMN05421755_10999 | Cysteine desulfurase. | Nitrogen fixation protein NifU. | 0.999 |
SDY18537.1 | SDZ06950.1 | SAMN05421755_101066 | SAMN05421755_109910 | Cysteine desulfurase. | Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domain. | 0.946 |
SDY18537.1 | erpA | SAMN05421755_101066 | SAMN05421755_101261 | Cysteine desulfurase. | Iron-sulfur cluster insertion protein; Required for insertion of 4Fe-4S clusters. | 0.844 |
SDY59668.1 | SDY18537.1 | SAMN05421755_103222 | SAMN05421755_101066 | Hypothetical protein. | Cysteine desulfurase. | 0.600 |
SDY59668.1 | SDZ06840.1 | SAMN05421755_103222 | SAMN05421755_10994 | Hypothetical protein. | Iron-sulfur cluster assembly protein; Belongs to the HesB/IscA family. | 0.478 |
SDY59668.1 | SDZ06879.1 | SAMN05421755_103222 | SAMN05421755_10996 | Hypothetical protein. | Fe-S cluster assembly ATP-binding protein. | 0.996 |
SDY59668.1 | SDZ06917.1 | SAMN05421755_103222 | SAMN05421755_10998 | Hypothetical protein. | Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.900 |
SDY59668.1 | SDZ06935.1 | SAMN05421755_103222 | SAMN05421755_10999 | Hypothetical protein. | Nitrogen fixation protein NifU. | 0.885 |
SDY59668.1 | erpA | SAMN05421755_103222 | SAMN05421755_101261 | Hypothetical protein. | Iron-sulfur cluster insertion protein; Required for insertion of 4Fe-4S clusters. | 0.478 |
SDZ06821.1 | SDY18537.1 | SAMN05421755_10993 | SAMN05421755_101066 | Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor. | Cysteine desulfurase. | 0.962 |
SDZ06821.1 | SDZ06840.1 | SAMN05421755_10993 | SAMN05421755_10994 | Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor. | Iron-sulfur cluster assembly protein; Belongs to the HesB/IscA family. | 0.964 |
SDZ06821.1 | SDZ06859.1 | SAMN05421755_10993 | SAMN05421755_10995 | Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor. | Iron-regulated ABC transporter membrane component SufB. | 0.823 |
SDZ06821.1 | SDZ06879.1 | SAMN05421755_10993 | SAMN05421755_10996 | Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor. | Fe-S cluster assembly ATP-binding protein. | 0.821 |
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