STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
korB_22-oxoglutarate oxidoreductase subunit KorB. (250 aa)    
Predicted Functional Partners:
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
  
 0.998
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
  
 0.998
porC_3
Pyruvate synthase subunit PorC.
 0.992
korA_2
2-oxoglutarate oxidoreductase subunit KorA.
 
 0.991
porC_2
Pyruvate synthase subunit PorC.
  
 0.984
porD_1
Pyruvate synthase subunit PorD.
  
 0.984
porC_5
Pyruvate synthase subunit PorC.
 0.971
porC_6
Pyruvate synthase subunit PorC.
 0.969
porC_7
Pyruvate synthase subunit PorC.
 0.967
korA_4
2-oxoglutarate oxidoreductase subunit KorA.
 
 0.965
Your Current Organism:
Sporomusa sphaeroides
NCBI taxonomy Id: 1337886
Other names: S. sphaeroides DSM 2875, Sporomusa sphaeroides DSM 2875
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.