STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLS55921.1Metal-dependent hydrolase. (368 aa)    
Predicted Functional Partners:
OLS57259.1
Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.
 
  
 0.688
OLS58327.1
NAD dependent epimerase/dehydratase family protein.
 
    0.667
OLS57258.1
Putative fatty-acid--CoA ligase fadD21.
  
  
 0.581
frsA
Esterase FrsA.
 
   
 0.552
OLS55920.1
Acetyltransferase (GNAT) family protein.
       0.503
OLS55922.1
Collagen triple helix repeat (20 copies).
  
    0.411
Your Current Organism:
Sporomusa sphaeroides
NCBI taxonomy Id: 1337886
Other names: S. sphaeroides DSM 2875, Sporomusa sphaeroides DSM 2875
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.