STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKG22176.1Phycocyanin; Derived by automated computational analysis using gene prediction method: Protein Homology. (162 aa)    
Predicted Functional Partners:
AKG22071.1
Photosystem I reaction center subunit XII; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phycobilisome linker protein family.
 
 
 
 0.944
AKG22183.1
Phycobilisome linker polypeptide; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.928
AKG20246.1
Photosystem I reaction center subunit XII; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
  
 
 
 0.926
AKG20249.1
Photosystem I reaction center subunit X; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phycobilisome linker protein family.
  
 
 
 0.921
AKG24622.1
Phycobilisome rod-core linker polypeptide CpcG; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phycobilisome linker protein family.
  
 
 
 0.919
AKG22204.1
Phycobilisome rod-core linker polypeptide CpcG; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phycobilisome linker protein family.
  
 
 
 0.919
AKG22175.1
Phycocyanin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.915
AKG22189.1
Bleomycin hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.911
AKG22177.1
Phycocyanobilin lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.882
AKG22184.1
CpcG; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phycobilisome linker protein family.
  
 
 
 0.875
Your Current Organism:
Calothrix sp. 3363
NCBI taxonomy Id: 1337936
Other names: C. sp. 336/3, Calothrix sp. 336/3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.