STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKG22496.1Acyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (202 aa)    
Predicted Functional Partners:
AKG22497.1
Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.680
AKG22498.1
Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.604
AKG19917.1
Chloramphenicol acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.518
AKG23982.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.491
AKG21000.1
Transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.451
AKG22588.1
Glycosyl transferase group 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.433
AKG22008.1
Lipopolysaccharide biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.432
AKG22624.1
Group 1 glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.400
Your Current Organism:
Calothrix sp. 3363
NCBI taxonomy Id: 1337936
Other names: C. sp. 336/3, Calothrix sp. 336/3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.