STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKG24730.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (205 aa)    
Predicted Functional Partners:
AKG20890.1
Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
     0.677
AKG22144.1
Cna B-type; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.635
AKG21623.1
Ferrichrome-iron receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.621
AKG22145.1
P pilus assembly protein, chaperone PapD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.620
AKG23009.1
Molecular chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.560
AKG20863.1
Laminin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.559
AKG23465.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.558
AKG20193.1
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.547
AKG20094.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.540
AKG22207.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.536
Your Current Organism:
Calothrix sp. 3363
NCBI taxonomy Id: 1337936
Other names: C. sp. 336/3, Calothrix sp. 336/3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.