STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKG23040.1Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (174 aa)    
Predicted Functional Partners:
AKG23039.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.900
AKG21499.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.749
AKG22106.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.749
AKG22432.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.749
AKG24240.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.749
AKG23041.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.583
AKG21397.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.539
AKG20439.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.490
AKG23038.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.435
Your Current Organism:
Calothrix sp. 3363
NCBI taxonomy Id: 1337936
Other names: C. sp. 336/3, Calothrix sp. 336/3
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.