STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000798825_00159Unannotated protein. (527 aa)    
Predicted Functional Partners:
GCA_000798825_00226
Unannotated protein.
   
 
 0.923
GCA_000798825_01975
Unannotated protein.
   
 
 0.920
GCA_000798825_01724
Unannotated protein.
  
 
 0.919
GCA_000798825_01045
Unannotated protein.
   
   0.908
GCA_000798825_02021
Unannotated protein.
 
   0.902
GCA_000798825_00088
Unannotated protein.
   
   0.901
GCA_000798825_00840
Unannotated protein.
   
   0.897
GCA_000798825_01988
Unannotated protein.
    
 0.896
GCA_000798825_01972
Unannotated protein.
    
  0.893
GCA_000798825_00180
Unannotated protein.
   
   0.892
Your Current Organism:
Carnobacterium sp. ZWU0011
NCBI taxonomy Id: 1339243
Other names: C. sp. ZWU0011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.