STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANA40650.1Signal peptidase I; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)    
Predicted Functional Partners:
ANA41680.1
Signal peptidase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.905
ANA40651.1
Back-translocating Elongation Factor EF4; binds to the ribosome on the universally-conserved alpha-sarcin loop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.896
ANA40728.1
asparagine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.779
ANA40079.1
DNA mismatch repair protein MutL; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.778
A2G06_08655
ATPase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.774
ANA40323.1
Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.764
ANA40592.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.738
A2G06_08980
Beta-ketoacyl-[acyl-carrier-protein] synthase II; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.721
ANA39189.1
Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.716
ANA41541.1
Protein translocase component YidC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.703
Your Current Organism:
Geobacter anodireducens
NCBI taxonomy Id: 1340425
Other names: CGMCC 1.12536, G. anodireducens, Geobacter anodireducens Sun et al. 2014, Geobacter sp. SD-1, KCTC 4672, strain SD-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.