STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000702445_00998Unannotated protein. (425 aa)    
Predicted Functional Partners:
GCA_000702445_04732
Unannotated protein.
 0.977
GCA_000702445_03346
Unannotated protein.
 0.947
GCA_000702445_01376
Unannotated protein.
 
 0.941
GCA_000702445_01377
Unannotated protein.
 
 0.941
GCA_000702445_01778
Unannotated protein.
 0.867
GCA_000702445_02611
Unannotated protein.
  
 0.736
GCA_000702445_04731
Unannotated protein.
  
  
 
0.715
GCA_000702445_04461
Unannotated protein.
  
  
  0.671
GCA_000702445_00501
Unannotated protein.
 
  
 0.641
GCA_000702445_02217
Unannotated protein.
  
 0.627
Your Current Organism:
Bryobacter aggregatus
NCBI taxonomy Id: 1340493
Other names: Acidobacteria bacterium MPL3, B. aggregatus MPL3, Bryobacter aggregatus MPL3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.