STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000702445_01851Unannotated protein. (281 aa)    
Predicted Functional Partners:
GCA_000702445_01852
Unannotated protein.
  
 
 0.887
GCA_000702445_04279
Unannotated protein.
 
     0.761
GCA_000702445_00301
Unannotated protein.
 
     0.758
GCA_000702445_01853
Unannotated protein.
       0.656
GCA_000702445_01854
Unannotated protein.
       0.642
GCA_000702445_01855
Unannotated protein.
       0.642
GCA_000702445_01856
Unannotated protein.
       0.625
GCA_000702445_03535
Unannotated protein.
 
  
 0.534
GCA_000702445_04307
Unannotated protein.
 
  
 0.527
GCA_000702445_01516
Unannotated protein.
 
  
 0.519
Your Current Organism:
Bryobacter aggregatus
NCBI taxonomy Id: 1340493
Other names: Acidobacteria bacterium MPL3, B. aggregatus MPL3, Bryobacter aggregatus MPL3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.