STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000702445_02566Unannotated protein. (319 aa)    
Predicted Functional Partners:
GCA_000702445_04636
Unannotated protein.
  
 
 0.950
GCA_000702445_00535
Unannotated protein.
 
 
0.861
GCA_000702445_00774
Unannotated protein.
  
 
 0.854
GCA_000702445_02567
Unannotated protein.
  
 
 0.837
GCA_000702445_00464
Unannotated protein.
  
 0.812
GCA_000702445_03596
Unannotated protein.
     
 0.761
GCA_000702445_04839
Unannotated protein.
  
 
 0.746
GCA_000702445_03553
Unannotated protein.
  
 
 0.720
GCA_000702445_04635
Unannotated protein.
  
 0.706
GCA_000702445_04390
Unannotated protein.
   
  0.697
Your Current Organism:
Bryobacter aggregatus
NCBI taxonomy Id: 1340493
Other names: Acidobacteria bacterium MPL3, B. aggregatus MPL3, Bryobacter aggregatus MPL3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.