STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000702445_04426Unannotated protein. (180 aa)    
Predicted Functional Partners:
GCA_000702445_04425
Unannotated protein.
       0.773
GCA_000702445_03483
Unannotated protein.
  
     0.749
GCA_000702445_00787
Unannotated protein.
  
     0.743
GCA_000702445_00464
Unannotated protein.
    
  0.638
GCA_000702445_04427
Unannotated protein.
       0.598
GCA_000702445_04428
Unannotated protein.
       0.598
GCA_000702445_04424
Unannotated protein.
   
   0.591
GCA_000702445_04429
Unannotated protein.
       0.574
GCA_000702445_04423
Unannotated protein.
       0.553
GCA_000702445_04430
Unannotated protein.
       0.547
Your Current Organism:
Bryobacter aggregatus
NCBI taxonomy Id: 1340493
Other names: Acidobacteria bacterium MPL3, B. aggregatus MPL3, Bryobacter aggregatus MPL3
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.