STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000702445_04991Unannotated protein. (1084 aa)    
Predicted Functional Partners:
GCA_000702445_04877
Unannotated protein.
  
  
  0.804
GCA_000702445_04253
Unannotated protein.
  
     0.763
GCA_000702445_01105
Unannotated protein.
  
     0.761
GCA_000702445_03825
Unannotated protein.
  
     0.757
GCA_000702445_05100
Unannotated protein.
  
     0.757
GCA_000702445_00784
Unannotated protein.
  
     0.756
GCA_000702445_00103
Unannotated protein.
  
     0.755
GCA_000702445_05084
Unannotated protein.
  
     0.753
GCA_000702445_03110
Unannotated protein.
  
     0.750
GCA_000702445_03111
Unannotated protein.
  
     0.738
Your Current Organism:
Bryobacter aggregatus
NCBI taxonomy Id: 1340493
Other names: Acidobacteria bacterium MPL3, B. aggregatus MPL3, Bryobacter aggregatus MPL3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.