STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000702445_05111Unannotated protein. (312 aa)    
Predicted Functional Partners:
GCA_000702445_05110
Unannotated protein.
       0.773
GCA_000702445_05106
Unannotated protein.
       0.547
GCA_000702445_05107
Unannotated protein.
       0.547
GCA_000702445_05108
Unannotated protein.
       0.547
GCA_000702445_05109
Unannotated protein.
       0.547
GCA_000702445_02762
Unannotated protein.
 
     0.539
GCA_000702445_02471
Unannotated protein.
 
     0.532
GCA_000702445_00624
Unannotated protein.
 
     0.505
GCA_000702445_00802
Unannotated protein.
  
     0.451
GCA_000702445_01395
Unannotated protein.
  
     0.417
Your Current Organism:
Bryobacter aggregatus
NCBI taxonomy Id: 1340493
Other names: Acidobacteria bacterium MPL3, B. aggregatus MPL3, Bryobacter aggregatus MPL3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.