STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1X05_13150Unannotated protein. (129 aa)    
Predicted Functional Partners:
C1X05_13145
Unannotated protein.
  
  
 0.908
C1X05_13155
Unannotated protein.
       0.779
C1X05_16465
Unannotated protein.
  
     0.733
C1X05_09470
Unannotated protein; Belongs to the UPF0342 family.
  
     0.704
C1X05_01750
Unannotated protein.
 
    0.639
C1X05_05965
Unannotated protein.
  
     0.634
ytxJ
Unannotated protein.
  
    0.619
C1X05_05000
Unannotated protein.
  
     0.618
C1X05_01765
Unannotated protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
    0.616
C1X05_02800
Unannotated protein.
  
     0.600
Your Current Organism:
Laceyella sacchari
NCBI taxonomy Id: 1341151
Other names: L. sacchari 1-1, Laceyella sacchari 1-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.