STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1X05_15860Unannotated protein; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (356 aa)    
Predicted Functional Partners:
C1X05_16005
Unannotated protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 0.950
C1X05_15855
Unannotated protein.
 
  
 0.840
C1X05_15995
Unannotated protein.
 
  
 0.734
C1X05_16010
Unannotated protein; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.711
C1X05_09320
Unannotated protein; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.692
C1X05_16015
Unannotated protein.
 
  
 0.562
C1X05_16020
Unannotated protein.
 
  
 0.559
C1X05_15985
Unannotated protein.
 
  
 0.537
mraY
Unannotated protein; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
  
  
 0.535
hisF
Unannotated protein; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.
  
    0.529
Your Current Organism:
Laceyella sacchari
NCBI taxonomy Id: 1341151
Other names: L. sacchari 1-1, Laceyella sacchari 1-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.