STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ESU29736.1Hypothetical protein. (209 aa)    
Predicted Functional Partners:
ESU29861.1
Hypothetical protein.
  
     0.686
ESU27155.1
ATP-dependent exodeoxyribonuclease.
  
     0.667
ESU26615.1
Hypothetical protein.
  
     0.622
ESU26962.1
Hypothetical protein.
  
     0.542
ESU29737.1
Transcriptional regulator, AsnC family protein.
       0.505
ESU25315.1
Hypothetical protein.
  
     0.444
ESU29758.1
Hypothetical protein.
  
     0.434
ESU25847.1
Putative integral outer membrane protein.
  
     0.422
ESU29976.1
ABC transporter-like protein.
  
     0.418
ESU29360.1
Hypothetical protein; Belongs to the arginase family.
  
     0.403
Your Current Organism:
Flavobacterium limnosediminis
NCBI taxonomy Id: 1341181
Other names: F. limnosediminis JC2902, Flavobacterium limnosediminis JC2902, Flavobacterium sp. JC2902, Flavobacterium sp. R6S-5-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.