STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ESU26047.1Glycosyl transferase, group 1 family protein. (356 aa)    
Predicted Functional Partners:
ESU25943.1
Glycoside hydrolase family protein.
 
     0.899
ESU25950.1
Hypothetical protein.
  
  
  0.768
ESU25944.1
Glycosyl transferase.
  
    0.767
ESU29879.1
Hypothetical protein.
    
 
 0.686
ESU27279.1
Capsular exopolysaccharide biosynthesis protein.
 
  
 0.662
ESU29133.1
Hypothetical protein.
  
     0.642
ESU26045.1
Sugar transferase.
 
 
 0.642
ESU27280.1
Polysaccharide export outer membrane protein.
  
 
 0.627
ESU29522.1
Hypothetical protein.
  
     0.616
ESU26392.1
Putative transmembrane glycosyltransferase.
  
  
  0.614
Your Current Organism:
Flavobacterium limnosediminis
NCBI taxonomy Id: 1341181
Other names: F. limnosediminis JC2902, Flavobacterium limnosediminis JC2902, Flavobacterium sp. JC2902, Flavobacterium sp. R6S-5-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.