STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ESU25307.1Glycosyl transferase family protein. (331 aa)    
Predicted Functional Partners:
ESU25306.1
Hypothetical protein.
 
     0.851
ESU25305.1
DNA polymerase III, delta subunit.
 
     0.792
ESU26045.1
Sugar transferase.
  
 
 0.762
ESU30006.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
 
 0.672
ESU29045.1
Riboflavin biosynthesis protein RibF; Belongs to the ribF family.
      0.648
ESU25308.1
Putative flagellar motor protein MotB.
       0.609
ESU30007.1
rmlC protein; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
  
 0.537
ESU26403.1
Hypothetical protein.
  
     0.509
ESU29730.1
Glycosyl transferase family protein.
  
     0.501
ESU26464.1
DNA-directed RNA polymerase.
  
     0.468
Your Current Organism:
Flavobacterium limnosediminis
NCBI taxonomy Id: 1341181
Other names: F. limnosediminis JC2902, Flavobacterium limnosediminis JC2902, Flavobacterium sp. JC2902, Flavobacterium sp. R6S-5-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.