STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z947_2644Transcriptional regulator, LuxR family. (193 aa)    
Predicted Functional Partners:
Z947_2645
Hypothetical protein.
       0.561
Z947_1785
Autoinducer synthesis protein.
    
 0.499
Z947_3759
Heat shock protein, Hsp20 family; Belongs to the small heat shock protein (HSP20) family.
    
   0.474
Z947_4176
Heat shock protein, Hsp20 family; Belongs to the small heat shock protein (HSP20) family.
    
   0.474
Z947_2646
Xanthine dehydrogenase family protein, medium subunit.
       0.446
Z947_2647
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein.
       0.446
Z947_2648
Hypothetical protein.
       0.446
Z947_2649
Hypothetical protein.
       0.446
Z947_2650
AA synth domain containing protein.
       0.446
Z947_2651
Hypothetical protein.
       0.446
Your Current Organism:
Sulfitobacter geojensis
NCBI taxonomy Id: 1342299
Other names: JCM 18835, KCTC 32124, S. geojensis, Sulfitobacter geojensis Kwak et al. 2014, Sulfitobacter sp. MM-124, strain MM-124
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.