STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z947_3697DUF952 domain containing protein. (116 aa)    
Predicted Functional Partners:
Z947_3698
Hypothetical protein.
      0.917
Z947_3699
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
       0.866
Z947_3700
Arsenate reductase.
       0.811
Z947_3696
5'-nucleotidase; Belongs to the 5'-nucleotidase family.
       0.589
gshB
Glutathione synthetase; Belongs to the prokaryotic GSH synthase family.
  
  
  0.434
Z947_1190
Arsenate reductase.
 
     0.430
Z947_1042
DUF1674 domain containing protein.
  
     0.418
Z947_1903
Acetyltransferase, GNAT family protein.
  
     0.401
Your Current Organism:
Sulfitobacter geojensis
NCBI taxonomy Id: 1342299
Other names: JCM 18835, KCTC 32124, S. geojensis, Sulfitobacter geojensis Kwak et al. 2014, Sulfitobacter sp. MM-124, strain MM-124
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.