STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z947_3702Thioesterase family protein. (168 aa)    
Predicted Functional Partners:
Z947_3703
Thioesterase family protein.
 
  
 0.973
Z947_3701
DNA-damage-inducible protein F.
 
     0.884
Z947_3704
Transcriptional regulater.
  
    0.735
Z947_1942
Elongation factor P.
  
     0.611
Z947_1449
Oxidoreductase, NAD-binding/iron-sulfur cluster-binding protein.
  
 
  0.530
Z947_3705
Transcriptional regulater.
  
    0.529
metG
Methionine-tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
 
     0.524
Z947_3758
DUF1150 domain containing protein.
  
     0.518
Z947_1786
ATPase.
  
     0.490
Z947_799
Phenylacetate-CoA oxygenase/reductase, PaaK subunit.
  
 
  0.486
Your Current Organism:
Sulfitobacter geojensis
NCBI taxonomy Id: 1342299
Other names: JCM 18835, KCTC 32124, S. geojensis, Sulfitobacter geojensis Kwak et al. 2014, Sulfitobacter sp. MM-124, strain MM-124
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.