STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z945_2108CP ATPgrasp 1 multi-domain protein. (784 aa)    
Predicted Functional Partners:
Z945_2107
Transglutaminase, N-terminal domain protein.
 
  
 0.971
Z945_2109
Putative bacterial transglutaminase domain family protein.
 
  
 0.967
Z945_3514
Hypothetical protein.
 
    0.907
Z945_676
Glutamate synthase, large subunit.
    
  0.889
Z945_2106
Transglutaminase-like protein.
 
  
 0.877
Z945_3513
Transglutaminase-like superfamily protein.
 
  
 0.874
Z945_3515
CP ATPgrasp 1 multi-domain protein.
 
   
0.705
Z945_2858
Proteasome-like protein.
 
  
 0.683
Z945_3844
Transglutaminase-like domain-containing protein.
  
  
 0.494
Z945_3169
Glutamate-cysteine ligase.
    
  0.446
Your Current Organism:
Sulfitobacter noctilucae
NCBI taxonomy Id: 1342302
Other names: JCM 18833, KCTC 32122, S. noctilucae, Sulfitobacter noctilucae Kwak et al. 2014, Sulfitobacter sp. NB-68, strain NB-68
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.