STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z945_2652Thymidylate synthase ThyX. (301 aa)    
Predicted Functional Partners:
Z945_2981
Deoxyuridine 5'-triphosphate nucleotidohydrolase.
    
 0.963
Z945_1641
Thymidylate kinase.
    
 0.957
Z945_2594
Non-ribosomal peptide synthetase.
 
 
 0.929
Z945_3285
Serine hydroxymethyltransferase.
   
 0.919
Z945_3275
Thymidine kinase.
    
 0.911
Z945_1224
Bifunctional protein FolD.
    
 0.907
Z945_2203
Phosphoribosylglycinamide formyltransferase.
   
 
 0.906
Z945_329
Methionyl-tRNA formyltransferase.
     
 0.901
Z945_61
Bifunctional purine biosynthesis protein PurH.
     
 0.898
Z945_1303
Methylenetetrahydrofolate reductase.
     
 0.892
Your Current Organism:
Sulfitobacter noctilucae
NCBI taxonomy Id: 1342302
Other names: JCM 18833, KCTC 32122, S. noctilucae, Sulfitobacter noctilucae Kwak et al. 2014, Sulfitobacter sp. NB-68, strain NB-68
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