STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z945_3293Cytidine deaminase. (131 aa)    
Predicted Functional Partners:
Z945_3294
Thymidine phosphorylase.
 
 
 0.997
Z945_3295
Phosphopentomutase.
     0.985
Z945_3275
Thymidine kinase.
    
 0.957
Z945_1138
Purine nucleoside phosphorylase DeoD-type.
 
 
 0.937
Z945_3326
5''''-nucleotidase.
 
  
  0.914
Z945_2363
5'-nucleotidase SurE.
  
  
 0.910
Z945_3296
Uracil phosphoribosyltransferase.
 
  
 0.858
Z945_310
GTPase Era.
  
    0.855
Z945_1267
S-methyl-5'-thioadenosine phosphorylase.
  
 
 0.851
Z945_55
Deoxyribose-phosphate aldolase.
 
 
 0.835
Your Current Organism:
Sulfitobacter noctilucae
NCBI taxonomy Id: 1342302
Other names: JCM 18833, KCTC 32122, S. noctilucae, Sulfitobacter noctilucae Kwak et al. 2014, Sulfitobacter sp. NB-68, strain NB-68
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.