STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAP_04490Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (329 aa)    
Predicted Functional Partners:
PAP_04480
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.797
PAP_04470
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.782
PAP_04485
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
PAP_04475
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.767
PAP_04460
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.756
PAP_04465
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.756
PAP_04530
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 
 0.754
PAP_04455
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.739
PAP_04450
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.720
PAP_04500
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.608
Your Current Organism:
Palaeococcus pacificus
NCBI taxonomy Id: 1343739
Other names: P. pacificus DY20341, Palaeococcus pacificus DY20341, Palaeococcus sp. DY20341
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.