STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGP58463.1Glycosidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (462 aa)    
Predicted Functional Partners:
AGP58464.1
Alpha-1,6-glucosidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the glycosyl hydrolase 13 family.
 
 0.993
AGP54902.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.953
AGP54409.1
Glycogen debranching protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.943
AGP54895.1
Alpha-glucan phosphorylase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.943
glgB
Hypothetical protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
0.939
AGP58455.1
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
  0.934
AGP60403.1
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
  0.934
AGP58255.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
  0.932
AGP57820.1
4-alpha-glucanotransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.928
AGP54413.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.926
Your Current Organism:
Streptomyces rapamycinicus
NCBI taxonomy Id: 1343740
Other names: S. rapamycinicus NRRL 5491, Streptomyces rapamycinicus NRRL 5491
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.