Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AGP59714.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (259 aa)    
Predicted Functional Partners:
AGP59715.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.820
AGP59709.1
Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.559
AGP59710.1
2-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.559
AGP59711.1
Erythritol kinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.559
AGP59712.1
Dihydroxyacetone kinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.559
AGP59713.1
Ribose 5-phosphate isomerase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.559
AGP57125.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.467
AGP55191.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.453
AGP56063.1
Protease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.453
AGP56614.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.453
Your Current Organism:
Streptomyces rapamycinicus
NCBI taxonomy Id: 1343740
Other names: S. rapamycinicus NRRL 5491, Streptomyces rapamycinicus NRRL 5491
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