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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGP60337.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (132 aa)    
Predicted Functional Partners:
AGP60334.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.985
AGP60338.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.983
AGP60339.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.983
AGP52577.1
Type IV secretion protein Rhs; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.969
AGP60333.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   0.969
AGP52581.1
Tail protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.960
AGP52583.1
Tail protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.960
AGP52673.1
Tail protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.960
AGP60325.1
Tail protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.960
AGP52578.1
Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   0.959
Your Current Organism:
Streptomyces rapamycinicus
NCBI taxonomy Id: 1343740
Other names: S. rapamycinicus NRRL 5491, Streptomyces rapamycinicus NRRL 5491
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.