STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR60732.1ABC-2 type transport system ATP-binding protein. (365 aa)    
Predicted Functional Partners:
SIR60713.1
ABC transporter efflux protein, DrrB family.
 
 0.964
SIS14833.1
ABC-2 type transport system permease protein.
 
 
 0.867
SIR68525.1
ABC-2 type transport system permease protein.
 
 
 0.850
SIR79156.1
ABC-2 type transport system permease protein.
 
 
 0.850
SIR86989.1
ABC-2 type transport system permease protein.
 
 
 0.850
SIR81286.1
ABC-2 type transport system permease protein.
 
    0.810
SIS14840.1
ABC-2 type transport system permease protein.
  
  
 0.806
SIR93817.1
ABC-2 type transport system permease protein.
 
  
 0.794
SIS09009.1
ABC-2 type transport system permease protein.
  
    0.755
SIS20011.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
   
  0.696
Your Current Organism:
Williamsia sterculiae
NCBI taxonomy Id: 1344003
Other names: CPCC 203464, DSM 45741, KCTC 29118, W. sterculiae, Williamsia sp. I12A-00824, Williamsia sp. I12A-01109, Williamsia sterculiae Fang et al. 2013, strain I12A-01109
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.