STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR64675.1Ferritin-like domain-containing protein. (317 aa)    
Predicted Functional Partners:
SIR63869.1
NAD(P)H-flavin reductase; Belongs to the globin family.
   
 
 0.843
SIR98702.1
Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding.
  
     0.455
SIR75573.1
Indolepyruvate ferredoxin oxidoreductase.
 
  
 0.452
SIR64693.1
Putative iron-dependent peroxidase.
  
    0.437
SIR64713.1
Hypothetical protein.
       0.434
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.418
SIS03538.1
Catechol-2,3-dioxygenase.
  
     0.414
SIS07165.1
Cysteine desulfurase.
   
 
  0.410
SIS04650.1
Nucleoside-diphosphate-sugar epimerase.
  
     0.404
Your Current Organism:
Williamsia sterculiae
NCBI taxonomy Id: 1344003
Other names: CPCC 203464, DSM 45741, KCTC 29118, W. sterculiae, Williamsia sp. I12A-00824, Williamsia sp. I12A-01109, Williamsia sterculiae Fang et al. 2013, strain I12A-01109
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