STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR67627.1Two-component system, OmpR family, sensor histidine kinase SenX3. (469 aa)    
Predicted Functional Partners:
SIR67645.1
Two component transcriptional regulator, winged helix family.
 0.993
SIR76070.1
Two-component system, OmpR family, response regulator MprA.
 0.972
SIS15033.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.971
SIS15703.1
Two component transcriptional regulator, winged helix family.
 0.963
SIS17760.1
Two component transcriptional regulator, winged helix family.
 0.953
SIR74265.1
Two component transcriptional regulator, winged helix family.
 0.923
SIR81391.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.923
SIS09408.1
Two-component system, OmpR family, response regulator.
 0.921
SIR94412.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain; Manually curated.
 0.919
SIS12514.1
Two-component system, OmpR family, KDP operon response regulator KdpE.
 0.911
Your Current Organism:
Williamsia sterculiae
NCBI taxonomy Id: 1344003
Other names: CPCC 203464, DSM 45741, KCTC 29118, W. sterculiae, Williamsia sp. I12A-00824, Williamsia sp. I12A-01109, Williamsia sterculiae Fang et al. 2013, strain I12A-01109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.