STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR68902.1Glycosyltransferase involved in cell wall bisynthesis. (401 aa)    
Predicted Functional Partners:
SIR68964.1
Acetyltransferase (isoleucine patch superfamily).
 
    0.826
gmd
GDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
 
  0.792
SIR68946.1
GDPmannose 4,6-dehydratase.
  
 
  0.792
SIR69004.1
Hypothetical protein.
  
    0.771
SIR69025.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.755
SIR68984.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.726
SIR69715.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.716
SIS05208.1
ATP-dependent DNA helicase, Rep family.
    
   0.714
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.646
SIR63463.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.639
Your Current Organism:
Williamsia sterculiae
NCBI taxonomy Id: 1344003
Other names: CPCC 203464, DSM 45741, KCTC 29118, W. sterculiae, Williamsia sp. I12A-00824, Williamsia sp. I12A-01109, Williamsia sterculiae Fang et al. 2013, strain I12A-01109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.