STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR69184.1Predicted acetyltransferase. (399 aa)    
Predicted Functional Partners:
SIR69202.1
Amino acid transporter.
       0.773
SIS21676.1
Major Facilitator Superfamily protein.
   
    0.644
SIS07873.1
Competence protein ComEA.
  
    0.510
SIR69291.1
Luciferase-like monooxygenase.
 
     0.507
SIR69214.1
Peptide/nickel transport system substrate-binding protein.
       0.467
SIR69227.1
Peptide/nickel transport system permease protein.
       0.467
SIR69243.1
Peptide/nickel transport system permease protein.
       0.467
SIR76403.1
Phosphoglycolate phosphatase.
  
     0.454
SIR69259.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.451
SIS16494.1
Transmembrane secretion effector.
   
    0.418
Your Current Organism:
Williamsia sterculiae
NCBI taxonomy Id: 1344003
Other names: CPCC 203464, DSM 45741, KCTC 29118, W. sterculiae, Williamsia sp. I12A-00824, Williamsia sp. I12A-01109, Williamsia sterculiae Fang et al. 2013, strain I12A-01109
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.