STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR69825.1Transcriptional regulator, MarR family. (159 aa)    
Predicted Functional Partners:
SIS16640.1
DNA-binding transcriptional regulator, MarR family.
  
     0.771
SIS23224.1
DNA-binding transcriptional regulator, MarR family.
  
     0.679
SIR69812.1
Hypothetical protein.
       0.549
SIS20706.1
Hypothetical protein.
  
    0.508
SIR69843.1
Transcriptional regulator, RpiR family.
       0.505
SIR69799.1
Hypothetical protein.
       0.440
SIR99820.1
Transcriptional regulator, MarR family.
  
     0.425
SIR74547.1
Transcriptional regulator, MarR family.
  
     0.401
Your Current Organism:
Williamsia sterculiae
NCBI taxonomy Id: 1344003
Other names: CPCC 203464, DSM 45741, KCTC 29118, W. sterculiae, Williamsia sp. I12A-00824, Williamsia sp. I12A-01109, Williamsia sterculiae Fang et al. 2013, strain I12A-01109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.