STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR74101.1Biotin-dependent carboxylase uncharacterized domain-containing protein. (292 aa)    
Predicted Functional Partners:
SIR74119.1
Sensor histidine kinase inhibitor, KipI family.
 0.999
pxpA
UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
 
 0.995
SIS22776.1
Urea carboxylase.
 
0.995
SIS22771.1
Allophanate hydrolase.
  
 0.948
SIR75606.1
acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein.
 
 
  0.929
SIR81159.1
Biotin carboxyl carrier protein /biotin carboxylase.
 
 
  0.929
SIS14548.1
propionyl-CoA carboxylase alpha chain.
 
 
  0.929
SIS20181.1
Glutamate synthase (NADH) large subunit.
   
 
  0.862
SIS21515.1
Glutamate synthase (NADH) large subunit.
   
 
  0.862
SIR81902.1
Hypothetical protein.
  
 
 0.699
Your Current Organism:
Williamsia sterculiae
NCBI taxonomy Id: 1344003
Other names: CPCC 203464, DSM 45741, KCTC 29118, W. sterculiae, Williamsia sp. I12A-00824, Williamsia sp. I12A-01109, Williamsia sterculiae Fang et al. 2013, strain I12A-01109
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