STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR79129.1Hypothetical protein. (60 aa)    
Predicted Functional Partners:
SIR79116.1
Condensation domain-containing protein.
       0.693
SIR79087.1
Condensation domain-containing protein.
       0.683
SIR79102.1
Condensation domain-containing protein.
       0.683
SIR79140.1
ABC-2 type transport system ATP-binding protein.
       0.411
SIR79156.1
ABC-2 type transport system permease protein.
       0.411
SIR79178.1
Glycosyl transferase family 2.
       0.411
Your Current Organism:
Williamsia sterculiae
NCBI taxonomy Id: 1344003
Other names: CPCC 203464, DSM 45741, KCTC 29118, W. sterculiae, Williamsia sp. I12A-00824, Williamsia sp. I12A-01109, Williamsia sterculiae Fang et al. 2013, strain I12A-01109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.