STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR86722.1LytR cell envelope-related transcriptional attenuator. (252 aa)    
Predicted Functional Partners:
SIR78957.1
Hypothetical protein.
  
     0.773
SIR80476.1
Hypothetical protein.
  
     0.771
SIS05438.1
Hypothetical protein.
  
     0.770
SIS05372.1
TIGR02569 family protein.
  
     0.769
SIS07605.1
Protein of unknown function.
  
     0.768
SIS03890.1
Hypothetical protein.
  
     0.763
SIR86295.1
Hypothetical protein.
  
     0.760
SIS02822.1
DivIVA domain-containing protein.
  
     0.760
SIR65548.1
Hypothetical protein.
  
     0.759
SIR92766.1
Heparin binding hemagglutinin HbhA.
  
     0.758
Your Current Organism:
Williamsia sterculiae
NCBI taxonomy Id: 1344003
Other names: CPCC 203464, DSM 45741, KCTC 29118, W. sterculiae, Williamsia sp. I12A-00824, Williamsia sp. I12A-01109, Williamsia sterculiae Fang et al. 2013, strain I12A-01109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.