STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR88168.1Alpha/beta hydrolase. (582 aa)    
Predicted Functional Partners:
SIR88183.1
Hypothetical protein.
       0.773
SIS02655.1
Type VII secretion protein EccE.
  
     0.692
SIR63756.1
Hypothetical protein.
  
     0.674
SIR79047.1
Type VII secretion integral membrane protein EccD.
  
     0.616
SIR62663.1
Hypothetical protein.
  
     0.583
SIS03595.1
Hypothetical protein.
  
     0.562
SIR75287.1
Hypothetical protein.
  
     0.561
SIS21271.1
Hypothetical protein.
  
     0.527
SIR88197.1
NADPH2:quinone reductase.
       0.523
SIS19059.1
Urease accessory protein.
  
     0.521
Your Current Organism:
Williamsia sterculiae
NCBI taxonomy Id: 1344003
Other names: CPCC 203464, DSM 45741, KCTC 29118, W. sterculiae, Williamsia sp. I12A-00824, Williamsia sp. I12A-01109, Williamsia sterculiae Fang et al. 2013, strain I12A-01109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.