STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR88729.1Protein of unknown function. (297 aa)    
Predicted Functional Partners:
SIR86625.1
Superfamily II DNA or RNA helicase.
  
     0.753
SIR88739.1
Membrane protein implicated in regulation of membrane protease activity.
       0.740
SIR88717.1
Hypothetical protein.
       0.697
SIR88746.1
SPFH domain, Band 7 family protein.
 
     0.667
SIR65434.1
Protein of unknown function.
  
   
 0.578
SIS22175.1
Transcriptional regulator, MarR family.
  
     0.576
SIS08797.1
Protein of unknown function.
  
     0.526
SIS19203.1
MerR HTH family regulatory protein.
  
     0.523
SIS23678.1
Uncharacterized protein, MTH1187 family.
 
     0.506
SIR99175.1
Predicted nucleic acid-binding protein, contains Zn-ribbon domain (includes truncated derivatives).
  
     0.491
Your Current Organism:
Williamsia sterculiae
NCBI taxonomy Id: 1344003
Other names: CPCC 203464, DSM 45741, KCTC 29118, W. sterculiae, Williamsia sp. I12A-00824, Williamsia sp. I12A-01109, Williamsia sterculiae Fang et al. 2013, strain I12A-01109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.